Here is a list of all documented class members with links to the class documentation for each member:

- _ -

• __init__() : lamellar , mode_metadynamics

- c -

• calculateFourierModes() : LamellarOrderParameter
• calculateWaveVectors() : LamellarOrderParameter
• CollectiveVariable() : CollectiveVariable
• CollectiveVariableWrap() : CollectiveVariableWrap
• computeForces() : LamellarOrderParameter , CollectiveVariable , CollectiveVariableWrap

- d -

• dump_grid() : mode_metadynamics
• dumpGrid() : IntegratorMetaDynamics

- e -

• enable_grid() : _collective_variable

- g -

• getCoordinates() : IndexGrid
• getCurrentValue() : CollectiveVariableWrap , LamellarOrderParameter , CollectiveVariable
• getDimension() : IndexGrid
• getIndex() : IndexGrid
• getLength() : IndexGrid
• getLogValue() : IntegratorMetaDynamics , LamellarOrderParameter
• getName() : CollectiveVariable
• getNumElements() : IndexGrid
• getProvidedLogQuantities() : IntegratorMetaDynamics , LamellarOrderParameter

- i -

• IndexGrid() : IndexGrid
• IntegratorMetaDynamics() : IntegratorMetaDynamics
• interpolateBiasPotential() : IntegratorMetaDynamics
• isInitialized() : IntegratorMetaDynamics

- l -

• LamellarOrderParameter() : LamellarOrderParameter

- m -

• m_add_hills : IntegratorMetaDynamics
• m_bias_potential : IntegratorMetaDynamics
• m_curr_bias_potential : IntegratorMetaDynamics
• m_cv : CollectiveVariableItem
• m_cv_max : CollectiveVariableItem
• m_cv_min : CollectiveVariableItem
• m_cv_values : IntegratorMetaDynamics
• m_delimiter : IntegratorMetaDynamics
• m_factors : IndexGrid
• m_file : IntegratorMetaDynamics
• m_filename : IntegratorMetaDynamics
• m_fourier_modes : LamellarOrderParameter
• m_gpu_mode : LamellarOrderParameterGPU
• m_grid : IntegratorMetaDynamics
• m_grid_index : IntegratorMetaDynamics
• m_is_appending : IntegratorMetaDynamics
• m_is_initialized : IntegratorMetaDynamics
• m_lattice_vectors : LamellarOrderParameter
• m_lengths : IndexGrid
• m_log_name : LamellarOrderParameter
• m_log_names : IntegratorMetaDynamics
• m_mode : LamellarOrderParameter
• m_num_points : CollectiveVariableItem
• m_num_update_steps : IntegratorMetaDynamics
• m_overwrite : IntegratorMetaDynamics
• m_phases : LamellarOrderParameter
• m_restart_filename : IntegratorMetaDynamics
• m_sigma : CollectiveVariableItem
• m_stride : IntegratorMetaDynamics
• m_suffix : IntegratorMetaDynamics
• m_sum : LamellarOrderParameter
• m_T_shift : IntegratorMetaDynamics
• m_use_grid : IntegratorMetaDynamics
• m_variables : IntegratorMetaDynamics
• m_W : IntegratorMetaDynamics
• m_wave_vectors : LamellarOrderParameter

- o -

• openOutputFile() : IntegratorMetaDynamics

- p -

• prepRun() : IntegratorMetaDynamics
• printStats() : IntegratorMetaDynamics

- r -

• readGrid() : IntegratorMetaDynamics
• registerCollectiveVariable() : IntegratorMetaDynamics
• removeAllVariables() : IntegratorMetaDynamics
• restart_from_grid() : mode_metadynamics
• restartFromGridFile() : IntegratorMetaDynamics

- s -

• set_params() : mode_metadynamics
• setAddHills() : IntegratorMetaDynamics
• setBiasFactor() : CollectiveVariable
• setGrid() : IntegratorMetaDynamics
• setLengths() : IndexGrid
• setupGrid() : IntegratorMetaDynamics

- u -

• update() : IntegratorMetaDynamics
• updateBiasPotential() : IntegratorMetaDynamics

- w -

• writeFileHeader() : IntegratorMetaDynamics